Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDCGQVNSSLAACIPYLTGAD---A------------APSASCCAGVKNLKALAPTTAACACIKAAAARYP--T-I-------KEDAASSLPKNCGVEMNIPISKTTNCQAIN
1SM7 Chain:A ((14-101))
--------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE----DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44079 for 427 contacts (-103.2/contact) +
2D Compatibility (PS) -6483 + (NN) -1867 + (LL) 1516
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -54763.0 ( -128.25 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: