Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALGCGSVIS--YLSPCLPYVTNRGPLGGC---CNGVKGLYGAAR-----------STPDRQAACNCLKSLAATS-----GNINLSKAAGLPKQCNVNIPYQISPSTDCTKVR-------- |
| 1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27807 for 461 contacts (-60.3/contact) +
2D Compatibility (PS) -8601 + (NN) 569 + (LL) -68
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -38857.0 ( -84.29 by residue)
QMean score : 0.389
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