Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADDDAVLLC----NMTRGGLEACKPSVR-----SGSSDPAADPSKECCAALAGADLPCLC---------------SYRHSFLLPSL-GIDPDLALQL------PAKCNLTATPG---C-----
1BEA Chain:? ((5-120))
-------SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17937 for 415 contacts (-43.2/contact) +
2D Compatibility (PS) -8520 + (NN) -3663 + (LL) 428
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -35142.0 ( -84.68 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: