Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APPSCQTVTTQLAPCLSYIQNRVKGGG-N-----PSVPCCTGINNIYELAKTKEDRVAICNCLKNAFIHAG---N---------VN---------PTLVAELPKKCGISFNMPPIDKNYDCNT
1B1U Chain:A ((14-109))
--------HNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41353 for 438 contacts (-94.4/contact) +
2D Compatibility (PS) -6714 + (NN) 1118 + (LL) 932
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -48167.0 ( -109.97 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: