Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDRMALKLAPCASAAQNPS----S-A----PSNGCCTAVHTIGKQSPQCLCAVMLSK---TAK------K---S--------GIKPEVAITI--PKRCNLVDRPVGYKCGDYTLP
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24559 for 402 contacts (-61.1/contact) +
2D Compatibility (PS) -6304 + (NN) -30 + (LL) 464
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -34629.0 ( -86.14 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: