Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAEVSCGDAVSALIPCGSFLV----GAVAGAP----SESCCRGAQGLRRMAGTPGARRALCRCLEQSGPSF----GV-------L----------PDRARQL--PALCKLGISIPVSPHTDCDKIQ
1BEA Chain:A ((16-110))
-----------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47590 for 376 contacts (-126.6/contact) +
2D Compatibility (PS) -6379 + (NN) 1373 + (LL) 1064
1D Compatibility (HY) -400 + (ID) 700
Total energy: -52632.0 ( -139.98 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: