Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCQQALTELIPCRPFLIATA---P------------SPTAPCCTGVSDVKAAASTTEARRDLCECFEKNAPGY---G-VK-------PEKAKLLPGLCGVTVPVPIDPSVNCTTIT
1SM7 Chain:A ((14-101))
--------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35468 for 404 contacts (-87.8/contact) +
2D Compatibility (PS) -5945 + (NN) 3105 + (LL) 2144
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -40064.0 ( -99.17 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: