Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAPAPEPTAEAPGPDCFTNLLSLSDCLTYVEAGSNLTKPEKPCCPELAGLVEST-PQCLCYLLDKNATSSYGFNIDMNRALNLPTV-CKVSTPPVSLCSG-
1HYP Chain:? ((6-80))
-------------PSCP----DLSICLNILGGSLGTVD---DCCALIGGLGDIEAIVCLCIQLRA-----LGI-LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46402 for 458 contacts (-101.3/contact) +
2D Compatibility (PS) -7438 + (NN) -1184 + (LL) 556
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -61618.0 ( -134.54 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: