Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----QQQPANCNGQLNQ---LIPCLSYVQ------------GQATQPAQGCCSGLKSIAGSNPACLCSLISANAGSIPGIN-----STLALELPAKCNLQGLNPSLCSGKF
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---SQPCQM--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44133 for 517 contacts (-85.4/contact) +
2D Compatibility (PS) -8123 + (NN) -2414 + (LL) 64
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -61256.0 ( -118.48 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: