Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------AITCGTVTGSLAPCIGYLKG---GSGPS----AACCGGVKRLNSAATTTPDRQAACNCLKSAAGAI-------SGLN----PNIAAGLPGKCGVNIPYKIS--TSTNCATIRA----
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66172 for 558 contacts (-118.6/contact) +
2D Compatibility (PS) -8483 + (NN) -2963 + (LL) 324
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -84594.0 ( -151.60 by residue)
QMean score : 0.221
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: