Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIIIDGKKIASGLCEKLSQRIDVLKR-EHSIFPCLKVIFVGNNPASQVYVRNKQKKAESIGISSETIVLPDNILENELIEKINELNNDRFVNGILVQLPLPN--HINASKVINTVSVEKDVDAFHRENVGKLVKGE-KNCLVPCTPKGALHLIKLVETNLSGKNAVVIGRSNIVGKPMFHLLLQENCTVTILHSQSKDLAEYCSKADVVVTAVGKPNFVQEGWIKEGAIVIDVGINSVSIEGKTKLIGDVDFDRVKEKTKAITPVPGGVGPMTIAFLMINTVIAACLQKKVDASDFVS |
1A4I Chain:A ((3-296)) | PAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY-------KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -199729 for 2458 contacts (-81.3/contact) +
2D Compatibility (PS) -30512 + (NN) -11632 + (LL) 868
1D Compatibility (HY) -22400 + (ID) 6500
Total energy: -269905.0 ( -109.81 by residue)
QMean score : 0.546
|
|
|