Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATF-FLLGERINKKTSEIVKKIYNAGHELGNHSWS--HKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSP--YGCHDDNLIKNTNQLNMCSILWTVDSLDWQGDKP--EILVDRVVGNVHNGAIILFHDHDNKSNTVEALPQIIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
| 2VYO Chain:A ((17-220)) | ----------------------------------------------DVPDVCTNSGMIAINFVDGPVRGVTDRILNTLDELGVKATFSFTVNQKAVGNVGQLYRRAVEEGHNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLSGTEIRYAAVPICNGQVNSEMYNILTERGVLPVGYTFCPYDYDDPVGEFESMIEGSD-PKHHSFIILMHDGQ--EADTSRLENMVKIGKDKGYRFVNMDECLQGYK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76719 for 1568 contacts (-48.9/contact) +
2D Compatibility (PS) -20760 + (NN) -4280 + (LL) 3188
1D Compatibility (HY) -8800 + (ID) 1900
Total energy: -109271.0 ( -69.69 by residue)
QMean score : 0.422
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