Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQ--PEKTESTGLVLNIESPIL--IIL--CILSVAY----------------FIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRFFMIR--
4G7X Chain:A ((3-94))
INCDPNTTTSHQLLFGFGSPIVQSVLFDGCMLDIEKDDYGFVWSCLSNENGDYCKGLYKPRFTQGVSPNWPMCDLSGASAERCIYPYCPEGE
General information:
TITO was launched using:
RESULT:
Template:
4G7X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23351 for 419 contacts (-55.7/contact) +
2D Compatibility (PS) -6965 + (NN) 131 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 750
Total energy: -37335.0 ( -89.11 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_4G7X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G7X-query.scw
PDB file :
Tito_Scwrl_4G7X.pdb
: