Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVTFGCRLNFYESELIKEALRKAERENVVVVHSCAVTNEAERQVKQKIRKIYKNDPNKEIIVVGCAVQLDPESYSNIPGVSKVLGNQDKLKTENYLLSNNKILVNDNQASKSEPALIDKFKDKSRAFIEVQNGCDHSCTFCSITEARG----NNRSVPINNIIEQIKIFVANGYQEVVFTGV--DITDFGTDLFGKPSLGLMVRRVLKDVPELKRLRLSSIDVAEVDDELMDLIVNESRFMPHLHLSLQSGNNLILKRMKRRHSREQVIEFCHKVKSLRSNIAYGADIIAGFPTETDEMFQDTVNLLEETN--TVYLHAFPYSKRKNTPAARMPQVPENVRKERVKNLRKINKAMMSNFYQSLIGTKQSVLVEQNNIGRAENFALVKFTSKIQAKSIVKATIIGMESGYLVGSIIP |
| 1R30 Chain:A ((72-277)) | ------------------------------------------------------------------------------------------------------------------------------------KTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDM-----PYLEQMVQGVKAM-----GLEACM-TLGTLSESQAQRLA--NAGLDYYNHNLDT-SPEFYGNIITTRTYQERLDTLEKVRDAG--IKVCSGGIVGL-GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQT--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97352 for 1557 contacts (-62.5/contact) +
2D Compatibility (PS) -20761 + (NN) -6930 + (LL) 10168
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -118725.0 ( -76.25 by residue)
QMean score : 0.466
|
|
|