Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSRSFFPEGASLEGKVKTIAELNQKLESRKSHSAEKVHQGFERIVELDHQCKGKGIFR-SGKVA
1HA9 Chain:A ((1-34))
-------------------------------SGSDGGVCPKILKKCRRDSDCPGACICRGNGYCG
General information:
TITO was launched using:
RESULT:
Template:
1HA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7813 for 192 contacts (40.7/contact) +
2D Compatibility (PS) -3280 + (NN) 609 + (LL) 2184
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 4876.0 ( 25.40 by residue)
QMean score : -0.008
(partial model without unconserved sides chains):
PDB file :
Tito_1HA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HA9-query.scw
PDB file :
Tito_Scwrl_1HA9.pdb
: