Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCGIFGAVSDGDSVIPTLLAGLRKLEYRGYDSSGIAIINNEGKIEVQKSEGKVERLCEVVGNSRMSSSTVGIAHTRWATHGIPDLKNAHPIRTNNVVVAHNGVIENYNLLKKGLEERGIPFHTDTDTEVIPNMLTLYLNEGLSPIDSLFKCLSNLHGSFALVLLFAEYPDVLFVAKRSLPLAIGYNYNTVFAASDSNTLNTLVERISYLEDNDVAVIKSSGVSIYNNGAQVKRSIENNSSSSFLISKNGYSSFMLKEIFEQPCVLNKTINQFYKK--YTEVISTSKKLFSKLS------YITIVGCGSSYFAGLIAKYWLESVAQVRVYLEISSEFRYSNIRLEEGSIGLFISQSGETADTMEALRYAKSQKQTTISITNTFNSGIEKISDVVLHTLAGPEIGVASTKTFSTQLAILACFTLELAKIKDTIDEK-RTKQLSNAINSIPEYVEYVLNVI-KIQHIPDIILEHNSIILIGRGSSYGVAMEGALKIKELSYINTIGIAAGEMKHGSIALIDSSVLVIAIIPYDNLFFKTLSNIQEVIARKGKVIAFSDKQGVPFLREICKEVIQLPDIDNFISPIIYSVAMQFLAHSVAIEKGLDADCPRNLAKSVTVE |
2PUW Chain:B ((4-355)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PYKHFMQKEIFEQP---DSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLSN--DSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSS--QKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGEL-----------LPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGD-------VHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVD------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214902 for 2950 contacts (-72.8/contact) +
2D Compatibility (PS) -34617 + (NN) -14640 + (LL) 17296
1D Compatibility (HY) -26000 + (ID) 5500
Total energy: -278363.0 ( -94.36 by residue)
QMean score : 0.477
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