Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC
2YWV Chain:A ((5-239))-TKQQLLYEGKAKKIYATDEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLREAGIANHFIEKLSPTEQLVRRVTIIPLEVVVRNVVAGSLAKRIGLEEGTPLEAPLVEFYYKNDDLGDPLLLEDHIFILKLASREEVAALKQAALAVNDVLRLHFAERNVRLIDFKLEFGRTA--DGAILLADEISPDTCRLWDAKTNEKLDKDVFRRDLGSLTDAYEVILQRLGGE--


General information:
TITO was launched using:
RESULT:

Template: 2YWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85329 for 1858 contacts (-45.9/contact) +
2D Compatibility (PS) -25174 + (NN) -4764 + (LL) 284
1D Compatibility (HY) -22000 + (ID) 5650
Total energy: -142633.0 ( -76.77 by residue)
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_2YWV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YWV-query.scw
PDB file : Tito_Scwrl_2YWV.pdb: