Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVVLSGYGLNCEKETAFAFVECGRKLGVNNIEVRIVHINEIIKNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKNNLLDKFQEFLSQDKLVIGICNGCQILAKLIPEFSNLALIRNDIGNYQCRWIKVKVSPQSSSVWLQDL-N--------ELYLPIAHGEGKFFMNQGVLDQLIENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGRVLALMPHPERGIFFTQQDNWPLEKEKCKRLKIAMPKYGDGMLIFENALRYFC |
| 1GPM Chain:A ((8-187)) | HRILILDFGSQYT-QLVARRVRELGVY-------CELWAWDVTEA-QIRDFNPSGIILSGGPESTTEEN------------SPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGH----VEASN--EREFGYAQVEVVND--SALVRGIEDALTADGKPLLDVWMSHGDKVT--------AI-PSDFITVASTE--------------SC---PFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89851 for 1427 contacts (-63.0/contact) +
2D Compatibility (PS) -18509 + (NN) -5236 + (LL) 2204
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -116242.0 ( -81.46 by residue)
QMean score : 0.312
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