Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMYRVLLVL---ALLTSSNLNALINYSKPISVDSRIKTFVY---SPNEVFTVIFSQGYYSYIEFAEGEKVKNIAVGDASSWRISPYDNKL-----LIMP------FEVSSRTNMIITTTKK----RNYIFDLISRPNYDKYPDT--DAEKVS-HDYSAEKDISYVVRFYYPKEEDEFDIDLDEISAPTQMQYVVDRPEKIIQENDTKYNYTYIDE--GGNADMIPIELFDDGYLTYFKFRDSNKIPQIFAKDGKTRLPCKRLLFDGYVIIK----------GVHKKLFMRYENDEVEIINRSL--------- |
| 3SHS Chain:A ((2-304)) | --AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADAT----SENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQ----REGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRKCSMEVVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53107 for 1652 contacts (-32.1/contact) +
2D Compatibility (PS) -27118 + (NN) 2565 + (LL) 1080
1D Compatibility (HY) -3600 + (ID) 2250
Total energy: -82430.0 ( -49.90 by residue)
QMean score : 0.154
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