Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQATYASISLPGISSVEDVLEDARFGKLFILVDDENRENEGDLIVLAEKLKPEHVAFMVRYGTGIVFLAMTRLHMGRLGLEFMRRSNIDEKLTPHTAFTTSIDARYGIATGVSAHDRTHTILTAIDGKSTQDDIITPGHVFPIIANDGGVLARNGHTEASVEIAKLIGYNHAAVGCELVND-DGSMMRLPELLKFAEQHNIKLTTIDKLIRYIKKLS
1TKU Chain:B ((5-204))
-------------FTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLA---------GTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYISK--
General information:
TITO was launched using:
RESULT:
Template:
1TKU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146760 for 1656 contacts (-88.6/contact) +
2D Compatibility (PS) -21196 + (NN) -7252 + (LL) 1388
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -194320.0 ( -117.34 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1TKU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TKU-query.scw
PDB file :
Tito_Scwrl_1TKU.pdb
: