Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNNLRDFIEALEKKRDLIRIKKEVSTILEMTEIHRRVSLNKGPAIIFENVVTENGKSVIPVLVNLFGTIERIAFGLNISPGELRDLGKLLAFLQSPEPPKNLKDVIKMFPLLKVVLSMRSKIVNKAPCQEVVLTGDDVDLSLLPIQTCWPNEPAPLITWPIVITKGPTEDKQDNFNLGIYRMQVMDKKTTLMRWLAHRGGASHHKRWKENGRSIKFPAAAVIGSDPATLIAAVTPVPETLSEYQFAGLLRKKPLELVNCKTISLQVPAHAEIVLEGYVSLDSYRNEGPYGDHTGYYNSVEQFPEFNITAITMRKNPIYLSTFTGKPPDEPSILGEALNEIFVPILI-NQFPEIVDFYLPPEGCSYRIAVVSVKKSYPGHAKRIIMGIFSFLKQFLYTKFIIVVDDDINI----RDWKEVMWAISTRMDPVRDTV--MIENAPIDYLDFASPESGLGGKMGFDATNKMPPETKREWGKKIEMSEEIVKKVTEKWDEYGLTDD-- |
| 4RDQ Chain:A ((1-366)) | -------------------------TVTYTNRVADARLGTFSQLLLQWKGSIYKLLYSEFLIFISLYFAI-SLVYRLILSESQRLMFEKLALYCNSY---------AELIPVSFVLGFYVSLVVSRWWAQYESIP--------------WPDRIMNLVSCNV--------DGEDEYGR-LLRRTLMRYSNLCSVLILRSVSTAVYKRFP--------SMEHVVRAGLMT----------PEEHKKFESLNSPHNKFWIPCVWFSNLAVKARN---EGRIR-DSVLLQGILNELNTLRSQCGRLYGYDWISI---------------PLVYTQVVTVAVYSFFLACLIGRQF-------LDPE------------KAYPGHELDLFVPVFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVDEMHQDLPI-----------LEKDLYWNEPDPQPPYTAATAEYK-------------RPSFLGSTFDIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98939 for 2398 contacts (-41.3/contact) +
2D Compatibility (PS) -36211 + (NN) 4702 + (LL) 9488
1D Compatibility (HY) -23200 + (ID) 3700
Total energy: -147860.0 ( -61.66 by residue)
QMean score : 0.166
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