Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNYFALFKIEPAFNISLDELEKKYIELSKTDINER---------QSQNMENINKAYQVLKSPLKRAEHLLNLFGVRSQEDQHNFEILNESMEIREYLLDCNNLQLASGMIDEKIKDCIKNLTNNFAVKNFDEAAMQVLRLKYLYKSFEEIKNETNSNF
2QSA Chain:A ((14-85))
-LENCYDVLEVNREE-FDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPDQRFYNYYQYYRLR---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QSA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10090 for 383 contacts (-26.3/contact) +
2D Compatibility (PS) -6722 + (NN) -3858 + (LL) 5540
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -18930.0 ( -49.43 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_2QSA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QSA-query.scw
PDB file :
Tito_Scwrl_2QSA.pdb
: