Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKFRAIQSKNKSILSREVHAAEFIPYSCYWNSTTLITKQDWLVKFIKLSGFAFETADDEDLVIQNNIRNQMLRSISSPAFGLYFHTIRRKKNIFSDEFASQNFPNFFANHVNLKWREKHATRQSFINDLYITIIRRADTKGVEFLSHLLKKFGHVTSKHAWESDMRATYEDLEETTNRVMTNLRSYSPKILGVKETPNGLFCEIMEFLSRIVNCGFITNTLLPLKTEISRYLPVHRLFFGRKMIQVVTHNESKYAGIVSIKEYGNNTSAGMLDHFLQLPYEFIITQSFQFTNRQMAIAKMQIQQNRMIQSADKAISQIAEISHALDD-AMSGRIVFGEHHLTILCIEKSPKSLDNALSFVESELSNC-GVYPIREKVN-------LEPAFWAQVPGN--FDYIVRKGTISSLNLAGFVSQHNYPTGNKFNNHWGDAVTVFDTTSGTPFFFNFHIRDVGHTMIIGPTGAGKTVLMNFLCA-QAMKFSPRIFFFDKDRGAEIFLRALGGIYTLIEPRTKTNFNPLQLDDT-PDNRTFLMEWIKSLISVYNDKFTSEDITRVNDAIEGNFKLRKEDRFLRNLV-PFLGLAGSDTLAGAISMWHGNGSH-AAIFDNKEDLLDFSKARVFGFEMASLLKDPIALGPVLIYLFHRISISLDGTPSIIVLDEAWALIDNPVFAPKIKDWLKVLRKLNAFVVFATQSVEDASKSAISDTLVQQTATQIFLPNLKATSIYRNVFMLTEREYILIKHTDPSTRFFLVKQGINAVVARIDLKGLDDIVNVLSGRAESVILLHDILKEVGDDPKVWLPIFYQKVKNV |
1G6O Chain:A ((6-328)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGNKVVWVLKNNGEWQPFDVRDRKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSI--MEFIPKEERIISIEDTE--EIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGS----SEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50109 for 2270 contacts (-22.1/contact) +
2D Compatibility (PS) -32217 + (NN) 585 + (LL) 38592
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -48799.0 ( -21.50 by residue)
QMean score : 0.176
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