Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTTQELKQYITRLFQLSNNETWECEALEEAAENI-LPERFINDSPLAHLTLETYTYYNNELHDLSIYPFLMYANNQLISVGYLNHFDMDFLYLTDTKNTIIDERHLLREGGTHHE
2PQ4 Chain:B ((1-35))
---------------MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQ-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 315 for 152 contacts (2.1/contact) +
2D Compatibility (PS) -3772 + (NN) -2146 + (LL) 6096
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -1407.0 ( -9.26 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2PQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PQ4-query.scw
PDB file :
Tito_Scwrl_2PQ4.pdb
: