Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPTVVIDLVDQLKG--NYSIKLILEVLNIPKSTYYRWKNKTYKNDTVTQKVIELCEANHYTYGYRKITALINQCYTSPINHKRVQRMMQKHHLNCRVRPKKTTRIGKPYYKTDNLLQR
1HLV Chain:A ((9-50))
-TFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKR----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HLV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22625 for 213 contacts (-106.2/contact) +
2D Compatibility (PS) -4041 + (NN) -153 + (LL) 5552
1D Compatibility (HY) 400 + (ID) 300
Total energy: -21167.0 ( -99.38 by residue)
QMean score : 0.760
(partial model without unconserved sides chains):
PDB file :
Tito_1HLV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HLV-query.scw
PDB file :
Tito_Scwrl_1HLV.pdb
: