Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MLMEKILYQTDEFKLKPSGW--YKTIPPKK------DGGTEFEIMLSGPI-AFTDRFIDPATRKEKVFLSDLNNIELVEKASILTALQLPSLIEY-GFTINEKHIRDLGFVLQQMRST-TPLSTIYSGVGMLHTLLGPLISLDQPYFSNEITNSTSIICDNKYDLIP---------KGNLSEWLQMYKEEVHGNLSLELDVLFGVSSLV----TAFLKYHNNVEFSGTIF---SFTG-QSSTGKSTAAMLAASVAGNPT-------KGTENLFRSWNATRNALEGYLSGNY-GVPIVLDELSAATFHDTTGLLYSFAEGQGRQRANI---NGDVKTPKN----------- |
| 3THI Chain:A ((1-362)) | ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDID---QAEDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASM-YLEALIDVTGQY---TEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGDYAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQDYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71450 for 2253 contacts (-31.7/contact) +
2D Compatibility (PS) -30670 + (NN) -6680 + (LL) 100
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -122500.0 ( -54.37 by residue)
QMean score : 0.180
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