Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLQTMSNSIFIKNLIFAINESLEYSETNSVMEVTFQKAIGFTQYNFEGEKL---------KLKDDLKELISLVGREEAVLIFVNRLNEGLYCILNQLIEWDNLNYQFAMYKEAMHNYLFNTIEKLNDDTLFLLHQDG---------LITLPEHKYKTVAVKSTF---GSRDFTFRFKFPEESDTVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKI---PIETKNLTS |
1YAR Chain:O ((10-237)) | ------KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGV---AVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGGGSQSPSLLLELRQIDA-----DFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28393 for 1281 contacts (-22.2/contact) +
2D Compatibility (PS) -20174 + (NN) -3147 + (LL) 1404
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -56660.0 ( -44.23 by residue)
QMean score : 0.165
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