Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHH-YYQPLWTLVGAGVSSLKSSRKDMESVIP-EGANWIKQ-AVSSFQPENNSVILGDNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFDV---GKYNKELERIVEERNITVNYNYNLVEIDGDKKVATFEHIKAYDRKTISYDMLHVTPPMGPL-DVVKESTLSDSEGWVDVNPTTLQHKSYSNVFALGDASNVP--TSKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 3KLJ Chain:A ((8-293)) | --KSTKILILGAGPAGFSAAKAAL--GK--CDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD------EIFSLYSYDDALKIKDEC----------KNKGKAFIIGGGILGIEL--AQAIIDSG----TPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM----------------GDLIRSSCVITAVGVKPNLDFIKDTEIA-SKRGILVND-HME-TSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163172 for 2346 contacts (-69.6/contact) +
2D Compatibility (PS) -29613 + (NN) -8483 + (LL) 7296
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -206622.0 ( -88.07 by residue)
QMean score : 0.428
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