Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKE-DKMIEIRRYLHQHPELSFH----------EDETAKYIAEFYKGK---DVEVET-NV--GPRGIKVTIDSGKPGKTLAIRADFDALPITED-TG--LSFASQN-KGVMHACGH---DAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGV--LDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQ--GKGGHGSSPH-MANDAIVAGSYFVTALQTVVSRRL-------------------------------SP-------------------FETGVVTIGSFDGK---G-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYND-DYPALYN--DP-EFTEYVAKTLKEANLDFGVE-MCEPQPPSED-FAYYAKERPSA----FIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 3PFE Chain:A ((5-471)) | -PQGLYDYICQQWQEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPG-QIDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQG-LPYPRCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSGAG-NYEQLWMTTS--LRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPP-YNAKVDFKIQNGGSKGWNAPLLSDWLAKAASEASMTY---YDKPAAYMGEGGTIPFMSMLGEQFPKAQFMITGVLGPH------SNAHGPNEFLHLDMVKKLTSCVSYVLYSFSQK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108632 for 3012 contacts (-36.1/contact) +
2D Compatibility (PS) -41237 + (NN) -23231 + (LL) 880
1D Compatibility (HY) -9200 + (ID) 2350
Total energy: -183770.0 ( -61.01 by residue)
QMean score : 0.414
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