Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIA-PTVSTDTVF-K-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA-GGYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNL-AGGYKSSLKLIDDLYEKLNIEKQSK |
| 2Q8P Chain:A ((3-260)) | ---------------------------------------------------GEFRIVPTTVALTMTLDKLDLPIVGKPTSYK------TLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQK-KH--PKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVK------DRQYISSNTENLLNINPDIILRLPHGMPEE---VKKMFQKEFKQNDIWKHFKAVKNNHVY-DLEEVPFGITANV--DADKAMTQLYDLFYK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29528 for 2039 contacts (-14.5/contact) +
2D Compatibility (PS) -26956 + (NN) -11667 + (LL) 4372
1D Compatibility (HY) -8800 + (ID) 2500
Total energy: -75079.0 ( -36.82 by residue)
QMean score : 0.583
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