Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREAVFTFPKNDEKLEQFIVELLQTELKDTQSMQYRESNPPATPET------FNDYEFYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNV---VVNEMLRQQVGDKTYEHFVQQI--------EASGKHVNDVEMIPVH----PWQFEHVIQVDLAEERLNGTVLWL--GESDELYHPQQ-SIRTMSPIDTTKYYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSYLNTQLSPYKQTQVYGALGVIWRENIYHMLIDEEDAIPFNALYASDKDGLPFI---EKWIKQYGSEAWTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDF--LHDAFFFINIAEIILFI-----EKQYGIDEQRQWQWVKDIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTNPLGVGGINDATTISET |
4XGC Chain:C ((1-676)) | MQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLV--DFVVGQAERDEVLPTAALLTGINQPDHLSQFTALTQRLHAQRAAMVCVLQSRDCAT-LKAAVETLVFGLVEDNAEVEQ----LRRSQCTMKQLKSWYTNNFDSEQKRRQLVVILPDFECF-------NASVLQDLILILSAHC----GSLPFVLVLGVATAMTAVHGTLPYHVSSKIRLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYCLMEHFFGGNAFALCTDYSKALGRIKQLTHEDMETIRRLPSFRPYVEQINDCKRIIAVLTDDDYLKKKLPQLLRDCLLHFLLFRCSLE--FLTELVG-DLPRCPLGKL-------------RRELYVNCLNR--AIISTPEYKECLQMLSFLSKDEFVAKVNRALERTEQFLVEEIAPL----------------------ELGEACTAVLRPKLEAIRLAVDEVG--------RALQKTLQLIETQ--IVQDHLRALQDAPPIHELFVFSDIATVRRNIIGAPRAALHTALNNPHFPDLSVVYKLHLECGRMINLFDWLQAFRSVVPQIQARFTRAVAELQFLGYIKMSKRKTDHATRLTW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28140 for 3693 contacts (-7.6/contact) +
2D Compatibility (PS) -53357 + (NN) 42 + (LL) 6296
1D Compatibility (HY) -22400 + (ID) 4300
Total energy: -101859.0 ( -27.58 by residue)
QMean score : 0.155
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