Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
| 2JSO Chain:A ((1-88)) | ----------------------------------------------------MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSP--LQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JSO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38422 for 624 contacts (61.6/contact) +
2D Compatibility (PS) -9268 + (NN) 1439 + (LL) 12688
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 40581.0 ( 65.03 by residue)
QMean score : 0.011
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