Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHAND-FDVLLMVYLSNYKKANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYKKEANVITNAPILNDSREFKEIENFKE----IVYQGQIV-MDRGYEEFIIASSAFKQNAP--SFIIRGFGPHEEVIKELISYNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF----------- |
| 2GEK Chain:A ((21-393)) | MRIGMVCPYSF---DVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHV---------KLPDYVVSGGKAVFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRPYHE--------KIIGRIAVSDLARRWQMEAL-GSDAVEIPNGVDVASFADAPLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLAGH-LRFLGQVDDATKASAMRSADVYCAPHLGGE-----SFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGIKVQVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90520 for 2887 contacts (-31.4/contact) +
2D Compatibility (PS) -36742 + (NN) -12271 + (LL) 2068
1D Compatibility (HY) -4400 + (ID) 2350
Total energy: -144215.0 ( -49.95 by residue)
QMean score : 0.329
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