Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQ--LALPVEFLF----------------EILCVGAPD-----
1QP2 Chain:A ((1-77))
MVQRGSKVRILRPE----SYWFQDVGTVASVDQSGIKYPVIVRFEKVNYSGINTNNFAEDELVEVEAPKAKPKK
General information:
TITO was launched using:
RESULT:
Template:
1QP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24938 for 246 contacts (-101.4/contact) +
2D Compatibility (PS) -5196 + (NN) -5253 + (LL) 508
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -39479.0 ( -160.48 by residue)
QMean score : 0.136
(partial model without unconserved sides chains):
PDB file :
Tito_1QP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QP2-query.scw
PDB file :
Tito_Scwrl_1QP2.pdb
: