Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMS-----SA-SDLKAQFYRGTLQRFYQSLHAEKLTPYVMSYDD---IISFCKENNISEVVIAGDIMSYHLEEYDILHQRSLFNEARIAVTLIRGNHYFKASKTMNQQGEPYKVFTSFYRKWRPYLRHRDV-YHYD----L-KS--FE---D--FVIAS---PDDLVFDDIAFGSSQVIEQNKWQHFLDQ--DIQNYESGRDYL-PEVLTSQLSVALAYGLLDIIEIFNDLLARYD--EDEANHEAFIRELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEANFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQFLTKDLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERFDAKALYIKTYLPIFNQIDAKYLHDTQRNESNLF-EQGIELGSHYPRQMVDHQEKRTQVLATFKALD |
| 1NP7 Chain:A ((6-483)) | PTVLVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELD--VERNLVKQLTILGIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQLLPSPNIKLELTAPPPEFFPQINFDHRSVLAFQ---GGETAGLARLQDYFWHGDRLKDYKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKRYEQERVSNDSTHWLIFELLWRDFFRFVAQKYGNKLFNRGGLLNKNFPWQEDQVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARD-FRYFNIPKQSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGVDYPRPCVNFHQSVEARRKIE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199369 for 3765 contacts (-53.0/contact) +
2D Compatibility (PS) -46855 + (NN) -12061 + (LL) 700
1D Compatibility (HY) -20000 + (ID) 4900
Total energy: -282485.0 ( -75.03 by residue)
QMean score : 0.416
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