Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVT-VDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDT-MDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4GUG Chain:B ((57-272))
---------------------EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSA----EQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKA---TVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGQISVADLRTVLTI-
General information:
TITO was launched using:
RESULT:
Template:
4GUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121821 for 1643 contacts (-74.1/contact) +
2D Compatibility (PS) -22604 + (NN) -12020 + (LL) 2808
1D Compatibility (HY) -12400 + (ID) 3600
Total energy: -169637.0 ( -103.25 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_4GUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GUG-query.scw
PDB file :
Tito_Scwrl_4GUG.pdb
: