Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDL--PIVGKPTSYKTLPN---RY--KDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF---DSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVK--DRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGI-TANVD-ADKAMTQLYDLFYKDKK
3GFV Chain:A ((29-299))---------------------------KVPKNPKKVVVFDFGSLDTLDKLGLDDIVAGLPKQV--LPKYLSKFKDDKYADVGSLKEPDFDKVAELDPDLIIISARQ-SESYKEFSKIA-PTIYLGVDTAKYMESFKSDAETIGKIFDKEDKVKDELANIDHSIADVKKTAEKLNKNGLV--IMANDGKISAFGPKSRYGLIHDVFGVAPADQNIKASTHGQSVSYEYISKTNPDYLFVIDRGTAIG-ETSSTKQVVENDYVKNVNAVKNGHVIYLDSATWYLSGGGLESMTQMIKEVKDGLEKEN-


General information:
TITO was launched using:
RESULT:

Template: 3GFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66322 for 2133 contacts (-31.1/contact) +
2D Compatibility (PS) -27798 + (NN) -17635 + (LL) 3948
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -119907.0 ( -56.22 by residue)
QMean score : 0.397

(partial model without unconserved sides chains):
PDB file : Tito_3GFV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFV-query.scw
PDB file : Tito_Scwrl_3GFV.pdb: