Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFHHISVMLNETIDYLNVKENGVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAKEVLKDHL-HKVTFVHSNFRELTQILKDLNIEKVDGIYYDLGVSSPQLDIPERGFS-YHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQPITTTLELVDIIKEGIPAKARRKGGHPAKRVFQALRIAVNDELSAFEDSIEQAIELVKVDGRISVITFHSLEDRLCKQVFQEYEKGPEVPRGLPVIPEAYTPKLKRVNRKPITATEEDLDDNNRARSAKLRVAEILK |
4PON Chain:A ((7-197)) | MILKKILPYSKELLKMAAGEGDIVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEAYQARTTLFHKSHDKIAKSLPPETHGKVAAAVFNLGNGSSTIKAIEQLLSIMKDEGLIVLVVYHGNDVLDF--CRNLDQQAARVLTYGFINQQNDPPFIVAIEKKAQ------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89366 for 1333 contacts (-67.0/contact) +
2D Compatibility (PS) -17818 + (NN) -2439 + (LL) 10712
1D Compatibility (HY) -8400 + (ID) 1500
Total energy: -108811.0 ( -81.63 by residue)
QMean score : 0.332
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