Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALI------KQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYV-KHTLVFKGNFKMFYDKRG |
3S4K Chain:A ((20-142)) | -------------------------------------------------------------------PFDSELGLQFTELGPDG-ARAQLDVRPKLL-QLTGVVHGGVYCAMIESIASMAAFAWLNSEGGSVVGVNNNTDFVRSISSGM-VYGTAEPLHRGRRQQLWLVTITDDTDRVVARGQVRLQNLEA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54978 for 822 contacts (-66.9/contact) +
2D Compatibility (PS) -11740 + (NN) 2294 + (LL) 5516
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -62608.0 ( -76.17 by residue)
QMean score : 0.414
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