Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
1Q7C Chain:B ((6-243))
----KIALVTGASRGIGRAIAETLAARGAKV-IGTATSENGAQAISDYLGANGK---GLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
1Q7C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106406 for 2041 contacts (-52.1/contact) +
2D Compatibility (PS) -25398 + (NN) -3385 + (LL) 704
1D Compatibility (HY) -22400 + (ID) 6650
Total energy: -163535.0 ( -80.12 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_1Q7C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q7C-query.scw
PDB file :
Tito_Scwrl_1Q7C.pdb
: