Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQY--PLLEHFEEDIAKDYLYVLE-ENDKIYGFIVVDQDQAEWYDDIDWPVN-REGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
2OH1 Chain:A ((15-167))
LVRFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTP-SDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKKN---------------------
General information:
TITO was launched using:
RESULT:
Template:
2OH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72476 for 972 contacts (-74.6/contact) +
2D Compatibility (PS) -15969 + (NN) -7369 + (LL) 1020
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -104094.0 ( -107.09 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2OH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OH1-query.scw
PDB file :
Tito_Scwrl_2OH1.pdb
: