Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLE---HLMAVKDNRVHQLISESIV------DVCRGELFQFQDQFNSQQTIINYLRRINR-KTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 4LLS Chain:A ((59-271)) | ------------------------------------TSGGKRLR-GFLVLETARLHDIAAGEAIWS-ATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTAA---LKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGL----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26187 for 1523 contacts (-17.2/contact) +
2D Compatibility (PS) -21162 + (NN) -5253 + (LL) 8872
1D Compatibility (HY) -8400 + (ID) 3550
Total energy: -55680.0 ( -36.56 by residue)
QMean score : 0.309
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