Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE
3DMO Chain:C ((28-135))
--------------------PYSNFKVGAALVTNDGKVFHGCNVENASYGLCNCAERTALFSALAAGYRPGEFAAIAVVGETHGPIAPCGACRQVMIELGKPTLEVVLTNMQGDVRVTSAGDLLPDAF------
General information:
TITO was launched using:
RESULT:
Template:
3DMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56833 for 809 contacts (-70.3/contact) +
2D Compatibility (PS) -12077 + (NN) -8049 + (LL) 1692
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: -86517.0 ( -106.94 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_3DMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DMO-query.scw
PDB file :
Tito_Scwrl_3DMO.pdb
: