Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHNNFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYEH
3HFJ Chain:B ((3-190))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE-
General information:
TITO was launched using:
RESULT:
Template:
3HFJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155138 for 1429 contacts (-108.6/contact) +
2D Compatibility (PS) -20304 + (NN) -7574 + (LL) 44
1D Compatibility (HY) -18800 + (ID) 3550
Total energy: -205322.0 ( -143.68 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_3HFJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HFJ-query.scw
PDB file :
Tito_Scwrl_3HFJ.pdb
: