Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD--------------HIAGRIEAGK--GNDVLGILCHVDVVPAG--DGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLT--VEGKAVHGMDPSIG-VNAGLYLLKFLASLNLDNNA---QAF-----------VAFSNR---YL--FNSDFGEK-----MGMKFHTDVMGDVTTN---------IGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQY------GFEVKL--GKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARN-L-D-KGVAFGAMFSDS-EDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE |
| 2ZOG Chain:A ((11-477)) | -VFQYIDENQDRYVKKLAEWVAIQSVSAWPE------KRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQK--D-KFFKDVDY-VCISD------------------------------------NYWLGK--NK----PCI--------------TYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ZOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106253 for 3267 contacts (-32.5/contact) +
2D Compatibility (PS) -43540 + (NN) -15563 + (LL) 4676
1D Compatibility (HY) -7600 + (ID) 3500
Total energy: -171780.0 ( -52.58 by residue)
QMean score : 0.408
|
|
|