Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------MIRNRLSELLSERGLKISRVAKDVKIARSSLTSMAQNDSE--------MIRYDAIDKLCSYLH------------------------ISPSEFFEHNPINFDFTFDEEPNYKI-----NDVFEGFEVTANITHAFSIENFDFEILVDVELDNRQK------------------LNFDLDVSYKETEKITNSQHRFIFTIKNEDENIGLK-KYVDSL------SAGLKNLLFKKINQKLSGYVSEII--------VKNIDDIEELFPNKGEKSTTLHKEILQTDSRLSSDIFKEY----- |
4R6Y Chain:A ((1-317)) | SMESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNTDTASAIPDANNLYSPLVKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDAGFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMER--NPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKVTES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4500 for 1416 contacts (3.2/contact) +
2D Compatibility (PS) -23392 + (NN) -8954 + (LL) 256
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -34940.0 ( -24.68 by residue)
QMean score : 0.215
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