Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRKYTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFAFFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMIGLRAYFNKNIVPMKDNLQMNAIKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSS-INLNMIDLSRSIGIILDNAIEASTEID----------DPIIRVAFIESENSVTFIVMNKCADD-IPR------------------------IHELFQESFSTKG-----EGRGLGLSTLKEIADNADNVLLDTII--ENGFFIQKVEIINN |
| 1I58 Chain:A ((13-188)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRLPL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I58.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58874 for 944 contacts (-62.4/contact) +
2D Compatibility (PS) -14219 + (NN) -543 + (LL) 22304
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -54482.0 ( -57.71 by residue)
QMean score : 0.542
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