Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHRE-MLDSVLSTFEIKPKYDLNIM-KSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFAGGLAAFYNQVPIGHVEAGLRSYDKYSPFPEEVNRQLVGVLA-DLHFAPTKNAASHLLSEGKYSESVVVTGNTAIDAMKYTVDDN-YKSNIMDKY-------HDKKF-ILMTAHRRENIGKPMENIFKAVRRLIDEYTDLALVYPMHKNPKVREVAQKILGSHDRIELIEPLDVVDFHNFA-KKSYFILTDSGGIQEEAPSFNKPVLVL-RSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDDERLYHQM-SEASNPYGDGFASERIVNHIKYYLNLITEKPSDF |
| 1F6D Chain:A ((2-376)) | ---KVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREML-DQVLKLFSIVPDYDLNI-MQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMY-HFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWL-MNHAWLILTDSGGIQEEAPSLGKPVLV-MRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQ-AMSRAHNPYGDGQACSRILEALKNNRISL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1F6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -157905 for 2950 contacts (-53.5/contact) +
2D Compatibility (PS) -38768 + (NN) -14464 + (LL) 1588
1D Compatibility (HY) -31200 + (ID) 8900
Total energy: -249649.0 ( -84.63 by residue)
QMean score : 0.549
|
|
|