Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKELTMDGKHTVPYTISVDGITALHR-TYFVFPENKKVLYQEIDSKVKNELAS--QRGVTTEKINNAQTATYTLTLNDGNKKVVNLKKN--DDAKNSIDPSTIKQIQIVVK
2J4X Chain:A ((108-206))
---------------------------------------------TIYMNIFGEQIPLKEQSKYKITFQNKFVTFQEIDVRLRKSLMSDNRIKLYEHN-SICKKGYWGIHYKDNTTKFTDLFTHPNYTDNETIDMSKVSHFDVYL-
General information:
TITO was launched using:
RESULT:
Template:
2J4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32370 for 607 contacts (-53.3/contact) +
2D Compatibility (PS) -10335 + (NN) -1348 + (LL) 2868
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -48935.0 ( -80.62 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2J4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J4X-query.scw
PDB file :
Tito_Scwrl_2J4X.pdb
: