Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIVLITGGN-KGLGYASAEALKALGYKVYIGSRNDVRGQQASQK------LGVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEVYQTNVFGIVRMMNTFVPLLEKS-EQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSSKSAVTMLTLQYAKGLP--NMQINAADPGATNTDLVGDFS---N-NSKHVSEGIKPIIQLATIGADGPTGTFIN-GDGEMPW |
| 3O38 Chain:A ((22-264)) | -GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP-VVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ----------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARH-------DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95345 for 1804 contacts (-52.9/contact) +
2D Compatibility (PS) -23451 + (NN) -9764 + (LL) 1292
1D Compatibility (HY) -5200 + (ID) 2800
Total energy: -135268.0 ( -74.98 by residue)
QMean score : 0.550
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